developer_environment

Laniakea Developer Environment

Ansible role to configure Laniakea Developer Environment. This DE has the purpose of helping Laniakea developers in testing tools and their configuration for Laniakea and its services development. This role can install these tools in an Ubuntu machine (currently it has been tested on Ubuntu 20.04):

Code Server: code-server is installed and some extensions are added for Python, C++, Ansible and Terraform. Pip and Ansible are also installed if Python and Ansible extensions are added.
Nextflow: Nextflow binary is downloaded and put in the user PATH. If both Nextflow and Code Server are installed, the Code Server extension for Nextflow is built and added to Code Server.
Conda: Conda is installed, a default conda environment is created with a defineable set of Python packages installed.
Docker: Docker is installed with the image directory in the external storage mountpoint.
NGINX.

Each tool is optional, and can be installed by setting to true its relative variable (see below). Also, Code Server, Conda and Docker are configured to write data in the external storage mountpoint.

Role Variables

VM variables

Variable	Description	Default
export_dir	External volume mountpoint	/export
user	VM user	ubuntu

Code Server variables

Variable	Description	Default
install_code_server	If set to true, Code Server is installed	false
code_server.password	Password to access Code Server	password
code_server.user	User to access Code Server	{{ user }}
code_server.host	Host	0.0.0.0
code_server.port	Port where Code Server is exposed	48888
code_server.data_dir	Data directory of Code Server	"{{ export_dir }}/code-server"
code_server.work_dir	Working directory of Code Server	"{{ export_dir }}/code-server/workdir"
code_server.env.SERVICE_URL	Extensions marketplace URL	https://open-vsx.org/vscode/gallery
code_server.env.ITEM_URL	Item URL for marketplace	https://open-vsx.org/vscode/item
code_server.extensions	List of code server extensions installed

Nextflow variables

Variable	Description	Default
install_nextflow	If set to true, Nextflow is installed	false
nextflow_dir	Directory where Nextflow bin is installed	/usr/local/bin
node_gpg_key_url	Node.JS gpg key URL	https://deb.nodesource.com/gpgkey/nodesource.gpg.key
node_repo	Deb Node.JS repository	deb https://deb.nodesource.com/node_14.x focal main
nextflow_extensions_repo_dest	Directory where the repo of Code Server extension for Nextflow is cloned	/tmp/vscode-language-nextflow
nextflow_extension_repo_url	Repository of Code Server extension for Nextflow	https://github.com/nextflow-io/vscode-language-nextflow.git
vsix_path	Directory where Code Server extension for Nextflow is built	/tmp/nextflow.vsix

Conda variables

Variable	Description	Default
install_conda	If set to true, Conda is installed	false
conda_gpg_key_url	Conda gpg key URL	https://repo.anaconda.com/pkgs/misc/gpgkeys/anaconda.asc
conda_repo	Deb Conda repository	deb [arch=amd64] https://repo.anaconda.com/pkgs/misc/debrepo/conda stable main
conda_script_path	Path of the Conda script installed by the Deb package	/etc/profile.d/conda.sh
conda_bin	Path of the conda binary installed by the Deb package	/opt/conda/condabin/conda
conda_envs_dir	Directory where conda environments are created	"{{ export_dir }}/conda_envs"
new_conda_env_name	Name of the default conda environment created by the role	default
new_conda_env_dir	Directory of the default conda env created by the role	"{{ conda_envs_dir }}/{{ new_conda_env_name }}"
new_conda_env_packages	Packages installed in the default conda env	[]
python_version	Python version for the default conda env	3.7

Docker variables

Variable	Description	Default
install_docker	If set to true, Docker is installed	false
docker.users	User running Docker	{{ user }}
docker.install_compose	If set to true, Docker compose is installed	false
docker_dir	Directory where Docker images are downloaded	{{ export_dir }}/docker-images

NGINX variables

Variable	Description	Default
install_nginx	If set to true, NGINX is installed	false

Example Playbook

---
# Install Code Server with the default extensions and Nextflow with its extensions
- name: Developer environment
  hosts: all
  roles:
    - role: laniakea.developer_environment
      vars:
        install_code_server: true
        install_nextflow: true

Author Information

Daniele Colombo

About

Configure Laniakea developer environment

role conda docker laniakea nextflow nginx

Install

ansible-galaxy install Laniakea-elixir-it/ansible-role-laniakea-developer-environment

GitHub repository

1 stars

0 forks

0 open issues

License

Unknown

Downloads

Owner

Laniakea-elixir-it